althonos / pyfamsa Star 32 Code Issues Pull requests Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments. bioinformatics genomics python-library python-bindings sequence-alignment cython-library multiple-sequence-alignment Updated Jun 16, 2025 Cython
althonos / pytrimal Star 26 Code Issues Pull requests Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD! python bioinformatics genomics python-library simd python-interface cython-wrapper multiple-sequence-alignment alignment-trimming Updated May 7, 2025 Cython
althonos / pymuscle5 Star 21 Code Issues Pull requests Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software. bioinformatics genomics python-library python-bindings muscle sequence-alignment cython-library multiple-sequence-alignment Updated May 8, 2024 Cython