Implementation of Needleman-Wunsch algorithm in Python Using Nested Functions.
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Updated
Jul 10, 2018 - Python
Implementation of Needleman-Wunsch algorithm in Python Using Nested Functions.
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Global and Local Sequence Alignment
GUI for software that can do global pairwise, local pairwise, multiple sequence Alignment.
A visual biology tool widget that can be used for string proximity matching, nucleic acid sequence generation at specified ratios, and match evaluation
A compilation of all the programs in my bioinformatics course
Global and local DNA sequence alignment
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Project in Python language for Bioinformatics course starting october '20, aimed at implementing Needleman-Wunsh algorithm.
Techniques to analyze biological data generated by genome sequencing, proteomics, cell-wide measurements of gene expression changes. Algorithms for single/multiple sequence alignments/assembly. Search algorithms for sequence databases, phylogenetic tree construction algorithms. Algorithms for gene/promoter and protein structure prediction.
Longest Common Subsequence algorithm. Global Alignment is the Needleman Wunsche algorithm and the local alignment is Smith Waterman algorithm
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This repository provides implementations for basic sequence alignment techniques, focusing on two popular methods: Dot Plot and Needleman-Wunsch algorithm.
A python implementation of the Needleman–Wunsch algorithm
🧬 This project implements the Needleman-Wunsch algorithm for global sequence alignment.
An algorithm used in bioinformatics to align protein or nucleotide sequences. It was one of the first applications of dynamic programming to compare biological sequences.
algorithm used in bioinformatics to align protein or nucleotide sequences. the algorithm finds the best alignments possible between the 2 strings. Techniques such as Recursive depth first traversing, dynamic programming were used.
Implementations of Needleman-Wunsch (global alignment) and Smith-Waterman (local alignment) algorithms using Python.
一些算法实践Algorithmic practice
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